The population genomics of archaeological transition in west Iberia: Investigation of ancient substructure using imputation and haplotype-based methods.

doi:10.1371/journal.pgen.1006852

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Article

The population genomics of archaeological transition in west Iberia: Investigation of ancient substructure using imputation and haplotype-based methods.

PLoS genetics - 1 Jul 2017

Martiniano Rui, Cassidy Lara M, Ó'Maoldúin Ros, McLaughlin Russell, Silva Nuno M, Manco Licinio, Fidalgo Daniel, Pereira Tania, Coelho Maria J, Serra Miguel, Burger Joachim, Parreira Rui, Moran Elena, Valera Antonio C, Porfirio Eduardo, Boaventura Rui, Silva Ana M, Bradley Daniel G

Abstract excerpt

We analyse new genomic data (0.05-2.95x) from 14 ancient individuals from Portugal distributed from the Middle Neolithic (4200-3500 BC) to the Middle Bronze Age (1740-1430 BC) and impute genomewide diploid genotypes in these together with published ancient Eurasians. While discontinuity is evident in the transition to agriculture across the region, sensitive haplotype-based analyses suggest a significant degree...

Topics

Archaeology
Chromosomes, Human, Y
Databases, Genetic
Europe
Female
Genetic Variation
Genetics, Population
Genome, Human
Genomics

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Genotype

Haplotypes

Humans

Male

Portugal

Sequence Analysis, DNA

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Identifiers

PMID: 28749934
DOI: 10.1371/journal.pgen.1006852
PMCID: PMC5531429

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