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Development and Evaluation of a High Density Genotyping 'Axiom_Arachis' Array with 58 K SNPs for Accelerating Genetics and Breeding in Groundnut.

Scientific reports - 16 Jan 2017

Pandey Manish K, Agarwal Gaurav, Kale Sandip M, Clevenger Josh, Nayak Spurthi N, Sriswathi Manda, Chitikineni Annapurna, Chavarro Carolina, Chen Xiaoping, Upadhyaya Hari D, Vishwakarma Manish K, Leal-Bertioli Soraya, Liang Xuanqiang, Bertioli David J, Guo Baozhu, Jackson Scott A, Ozias-Akins Peggy, Varshney Rajeev K

Abstract excerpt

Single nucleotide polymorphisms (SNPs) are the most abundant DNA sequence variation in the genomes which can be used to associate genotypic variation to the phenotype. Therefore, availability of a high-density SNP array with uniform genome coverage can advance genetic studies and breeding applications. Here we report the development of a high-density SNP array 'Axiom_Arachis' with 58 K SNPs and its utility in...

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PMID: 28091575
DOI: 10.1038/srep40577
PMCID: PMC5238394

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