Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Validation of Genotyping-By-Sequencing Analysis in Populations of Tetraploid Alfalfa by 454 Sequencing.

PloS one - 1 Jan 2015

Rocher Solen, Jean Martine, Castonguay Yves, Belzile François

Abstract excerpt

Genotyping-by-sequencing (GBS) is a relatively low-cost high throughput genotyping technology based on next generation sequencing and is applicable to orphan species with no reference genome. A combination of genome complexity reduction and multiplexing with DNA barcoding provides a simple and affordable way to resolve allelic variation between plant samples or populations. GBS was performed on ApeKI libraries...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Chromosome Mapping
Share to Genome, Plant
Share to Genotyping Techniques

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to High-Throughput Nucleotide Sequencing

Share to Medicago sativa

Share to Medicago truncatula

Share to Sequence Homology, Nucleic Acid

Share to Tetraploidy

Source

Open in PubMed Open full text

Identifiers

PMID: 26115486
DOI: 10.1371/journal.pone.0131918
PMCID: PMC4482585

Genes

ATF5

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 2 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Validation of Genotyping-By-Sequencing Analysis in Populations of Tetraploid Alfalfa by 454 Sequencing.PMID 26115486Read ↗

Prevalence of single nucleotide polymorphism among 27 diverse alfalfa genotypes as assessed by transcriptome sequencing.Semantic proximity Read ↗

Exploring the genetic diversity of the IPK Medicago germplasm collection using GBS.Semantic proximity Read ↗

A saturated genetic linkage map of autotetraploid alfalfa (Medicago sativa L.) developed using genotyping-by-sequencing is highly syntenous with the Medicago truncatula genome.Semantic proximity Read ↗

Genome Assembly of Alfalfa Cultivar Zhongmu-4 and Identification of SNPs Associated with Agronomic Traits.Semantic proximity Read ↗

Genome-wide SNP discovery in tetraploid alfalfa using 454 sequencing and high resolution melting analysis.Semantic proximity Read ↗

SNP discovery by amplicon sequencing and multiplex SNP genotyping in the allopolyploid species Brassica napus.Semantic proximity Read ↗

Development of an alfalfa SNP array and its use to evaluate patterns of population structure and linkage disequilibrium.Semantic proximity Read ↗

Using RNA-Seq for gene identification, polymorphism detection and transcript profiling in two alfalfa genotypes with divergent cell wall composition in stems.Semantic proximity Read ↗

Genome-wide SNP identification in multiple morphotypes of allohexaploid tall fescue (Festuca arundinacea Schreb).Semantic proximity Read ↗

Application of genotyping by sequencing technology to a variety of crop breeding programs.Semantic proximity Read ↗

Using genotyping-by-sequencing (GBS) for genomic discovery in cultivated oat.Semantic proximity Read ↗

High-throughput genotyping for species identification and diversity assessment in germplasm collections.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.