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Article

Making a chocolate chip: development and evaluation of a 6K SNP array for Theobroma cacao.

DNA research : an international journal for rapid publication of reports on genes and genomes - 1 Aug 2015

Livingstone Donald, Royaert Stefan, Stack Conrad, Mockaitis Keithanne, May Greg, Farmer Andrew, Saski Christopher, Schnell Ray, Kuhn David, Motamayor Juan Carlos

Abstract excerpt

Theobroma cacao, the key ingredient in chocolate production, is one of the world's most important tree fruit crops, with ∼4,000,000 metric tons produced across 50 countries. To move towards gene discovery and marker-assisted breeding in cacao, a single-nucleotide polymorphism (SNP) identification project was undertaken using RNAseq data from 16 diverse cacao cultivars. RNA sequences were aligned to the assembled...

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Identifiers

PMID: 26070980
DOI: 10.1093/dnares/dsv009
PMCID: PMC4535616

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 5 Sept 2026. Manifest publication-graph-cohort-2026-09-05.1.

Source receipt: pubmed, retrieved 5 Sept 2026.

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