De Novo assembly of the Japanese flounder (Paralichthys olivaceus) spleen transcriptome to identify putative genes involved in immunity.

doi:10.1371/journal.pone.0117642

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Article

De Novo assembly of the Japanese flounder (Paralichthys olivaceus) spleen transcriptome to identify putative genes involved in immunity.

PloS one - 1 Jan 2015

Huang Lin, Li Guiyang, Mo Zhaolan, Xiao Peng, Li Jie, Huang Jie

Abstract excerpt

BACKGROUND: Japanese flounder (Paralichthys olivaceus) is an economically important marine fish in Asia and has suffered from disease outbreaks caused by various pathogens, which requires more information for immune relevant genes on genome background. However, genomic and transcriptomic data for Japanese flounder remain scarce, which limits studies on the immune system of this species. In this study, we...

Topics

Animals
Complement System Proteins
Computational Biology
Cytokines
Databases, Nucleic Acid
Flounder
Gene Expression Profiling
Immunity
Microsatellite Repeats
Molecular Sequence Annotation
Polymorphism, Single Nucleotide

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Receptors, Antigen, B-Cell

Receptors, Antigen, T-Cell

Signal Transduction

Spleen

Toll-Like Receptors

Transcriptome

Source

Open in PubMed Open full text

Identifiers

PMID: 25723398
DOI: 10.1371/journal.pone.0117642
PMCID: PMC4344349

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