Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Identifying genetic diversity of avirulence genes in Leptosphaeria maculans using whole genome sequencing.

Functional & integrative genomics - 1 Aug 2013

Zander Manuel, Patel Dhwani A, Van de Wouw Angela, Lai Kaitao, Lorenc Michal T, Campbell Emma, Hayward Alice, Edwards David, Raman Harsh, Batley Jacqueline

Abstract excerpt

Next generation sequencing technology allows rapid re-sequencing of individuals, as well as the discovery of single nucleotide polymorphisms (SNPs), for genomic diversity and evolutionary analyses. By sequencing two isolates of the fungal plant pathogen Leptosphaeria maculans, the causal agent of blackleg disease in Brassica crops, we have generated a resource of over 76 million sequence reads aligned to the...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Ascomycota
Share to Australia

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Brassica

Share to Chromosome Mapping

Share to Evolution, Molecular

Share to Genome, Fungal

Share to Plant Diseases

Share to Virulence

Source

Identifiers

PMID: 23793572
DOI: 10.1007/s10142-013-0324-5

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Identifying genetic diversity of avirulence genes in Leptosphaeria maculans using whole genome sequencing.PMID 23793572Read ↗

Whole‐genome alignment‐based development of molecular markers for detecting Leptosphaeria maculans and Leptosphaeria biglobosa, the causal agents of blackleg disease in BrassicasSemantic proximity Read ↗

MPSeqM, a tool combining multiplex PCR and high-throughput sequencing to study the polymorphism of eight Leptosphaeria maculans avirulence genes and its application to field surveys in France.Semantic proximity Read ↗

Gene loss in the fungal canola pathogen Leptosphaeria maculans.Semantic proximity Read ↗

Estimating frequencies of virulent isolates in field populations of a plant pathogenic fungus, Leptosphaeria maculans, using high-throughput pyrosequencing.Semantic proximity Read ↗

Evolution of linked avirulence effectors in Leptosphaeria maculans is affected by genomic environment and exposure to resistance genes in host plants.Semantic proximity Read ↗

Determining frequencies of avirulent alleles in airborne Leptosphaeria maculans inoculum using quantitative PCRSemantic proximity Read ↗

Rapid identification of the Leptosphaeria maculans avirulence gene AvrLm2 using an intraspecific comparative genomics approach.Semantic proximity Read ↗

MPSeqM, a tool combining multiplex PCR and high-throughput sequencing to study the polymorphism of eight <i>Leptosphaeria maculans</i> avirulence genes and its application to field surveys in FranceSemantic proximity Read ↗

Whole Genome Alignment Based Development of Molecular Marker for Detecting <em>Leptosphaeria maculans</em> and <em>Leptosphaeria biglobosa</em>, the Causal Agent of Blackleg Disease in BrassicasSemantic proximity Read ↗

Recent Findings Unravel Genes and Genetic Factors Underlying Leptosphaeria maculans Resistance in Brassica napus and Its Relatives.Semantic proximity Read ↗

Genetic diversity and population structure of Leptosphaeria maculans isolates in Western Canada.Semantic proximity Read ↗

The Leptosphaeria maculans - Leptosphaeria biglobosa species complex in the American continentSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.