Article
Bambino: a variant detector and alignment viewer for next-generation sequencing data in the SAM/BAM format.
Bioinformatics (Oxford, England) - 15 Mar 2011
Edmonson Michael N, Zhang Jinghui, Yan Chunhua, Finney Richard P, Meerzaman Daoud M, Buetow Kenneth H
Abstract excerpt
SUMMARY: Bambino is a variant detector and graphical alignment viewer for next-generation sequencing data in the SAM/BAM format, which is capable of pooling data from multiple source files. The variant detector takes advantage of SAM-specific annotations, and produces detailed output suitable for genotyping and identification of somatic mutations. The assembly viewer can display reads in the context of either a...
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