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Article

Mapping transcription mechanisms from multimodal genomic data.

BMC bioinformatics - 28 Oct 2010

Chang Hsun-Hsien, McGeachie Michael, Alterovitz Gil, Ramoni Marco F

Abstract excerpt

BACKGROUND: Identification of expression quantitative trait loci (eQTLs) is an emerging area in genomic study. The task requires an integrated analysis of genome-wide single nucleotide polymorphism (SNP) data and gene expression data, raising a new computational challenge due to the tremendous size of data. RESULTS: We develop a method to identify eQTLs. The method represents eQTLs as information flux between...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 21044360
DOI: 10.1186/1471-2105-11-S9-S2
PMCID: PMC2967743

Genes

ADAMTS1
DSCAM
GART
PCP4
RIPK4

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