Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Single-cell and coupled GRN models of cell patterning in the Arabidopsis thaliana root stem cell niche.

BMC systems biology - 5 Oct 2010

Azpeitia Eugenio, Benítez Mariana, Vega Iliusi, Villarreal Carlos, Alvarez-Buylla Elena R

Abstract excerpt

BACKGROUND: Recent experimental work has uncovered some of the genetic components required to maintain the Arabidopsis thaliana root stem cell niche (SCN) and its structure. Two main pathways are involved. One pathway depends on the genes SHORTROOT and SCARECROW and the other depends on the PLETHORA genes, which have been proposed to constitute the auxin readouts. Recent evidence suggests that a regulatory...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Arabidopsis
Share to Gene Expression Profiling

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Gene Regulatory Networks

Share to Models, Biological

Share to Mutation

Share to Plant Roots

Share to Reproducibility of Results

Share to Stem Cell Niche

Source

Open in PubMed Open full text

Identifiers

PMID: 20920363
DOI: 10.1186/1752-0509-4-134
PMCID: PMC2972269

Genes

GRN

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Single-cell and coupled GRN models of cell patterning in the Arabidopsis thaliana root stem cell niche.PMID 20920363Read ↗

A single-cell Arabidopsis root atlas reveals developmental trajectories in wild-type and cell identity mutants.Semantic proximity Read ↗

Intersected functional zone of transcriptional regulators patterns stemness within stem cell niche of root apical meristem.Semantic proximity Read ↗

Interlinked nonlinear subnetworks underlie the formation of robust cellular patterns in Arabidopsis epidermis: a dynamic spatial model.Semantic proximity Read ↗

Protein complex stoichiometry and expression dynamics of transcription factors modulate stem cell division.Semantic proximity Read ↗

Root stem cell niche organizer specification by molecular convergence of PLETHORA and SCARECROW transcription factor modules.Semantic proximity Read ↗

SHR and SCR coordinate root patterning and growth early in the cell cycle.Semantic proximity Read ↗

Potentials of single-cell genomics in deciphering cellular phenotypes.Semantic proximity Read ↗

ROW1 maintains quiescent centre identity by confining WOX5 expression to specific cells.Semantic proximity Read ↗

Conserved factors regulate signalling in Arabidopsis thaliana shoot and root stem cell organizers.Semantic proximity Read ↗

A dynamic model for stem cell homeostasis and patterning in Arabidopsis meristems.Semantic proximity Read ↗

The PLETHORA genes mediate patterning of the Arabidopsis root stem cell niche.Semantic proximity Read ↗

Surfing along the root ground tissue gene network.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.