Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Quantitative analysis of a deeply sequenced marine microbial metatranscriptome.

The ISME journal - 1 Mar 2011

Gifford Scott M, Sharma Shalabh, Rinta-Kanto Johanna M, Moran Mary Ann

Abstract excerpt

The potential of metatranscriptomic sequencing to provide insights into the environmental factors that regulate microbial activities depends on how fully the sequence libraries capture community expression (that is, sample-sequencing depth and coverage depth), and the sensitivity with which expre...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Bacteria
Share to Gene Dosage
Share to Gene Expression Regulation, Bacterial

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genomic Library

Share to Proteomics

Share to Seawater

Share to Southeastern United States

Share to Transcriptome

Source

Open in PubMed Open full text

Identifiers

PMID: 20844569
DOI: 10.1038/ismej.2010.141
PMCID: PMC3105723

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 2 Sept 2026. Prepared record publication-20844569-2026-09-02.2. Manifest publication-graph-cohort-2026-09-02.2.

Source receipt: PubMed via Helena Literature Corpus, retrieved 2 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Quantitative analysis of a deeply sequenced marine microbial metatranscriptome.PMID 20844569Read ↗

Microbial metagenomics: beyond the genome.Semantic proximity Read ↗

A microarray for assessing transcription from pelagic marine microbial taxa.Semantic proximity Read ↗

Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre.Semantic proximity Read ↗

Genomes and gene expression across light and productivity gradients in eastern subtropical Pacific microbial communities.Semantic proximity Read ↗

Ocean plankton. Structure and function of the global ocean microbiome.Semantic proximity Read ↗

A system-level view on the function of natural eukaryotic biomes through taxonomically resolved metabolic pathway profilingSemantic proximity Read ↗

Integrated metagenomic and metatranscriptomic analyses of microbial communities in the meso- and bathypelagic realm of north pacific ocean.Semantic proximity Read ↗

Integration of absolute multi-omics reveals dynamic protein-to-RNA ratios and metabolic interplay within mixed-domain microbiomes.Semantic proximity Read ↗

Gene Content of Seawater Microbes is a Strong Predictor of Water Chemistry Across the Great Barrier ReefSemantic proximity Read ↗

Metagenome-based vertical profiling of the Gulf of Mexico highlights its uniqueness and far-reaching effects of freshwater inputSemantic proximity Read ↗

Microbial diversity in the deep sea and the underexplored "rare biosphere".Semantic proximity Read ↗

Genetic Diversity Affects the Daily Transcriptional Oscillations of Marine Microbial Populations.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.