Article
A re-annotation pipeline for Illumina BeadArrays: improving the interpretation of gene expression data.
Nucleic acids research - 1 Jan 2010
Barbosa-Morais Nuno L, Dunning Mark J, Samarajiwa Shamith A, Darot Jeremy F J, Ritchie Matthew E, Lynch Andy G, Tavaré Simon
Abstract excerpt
Illumina BeadArrays are among the most popular and reliable platforms for gene expression profiling. However, little external scrutiny has been given to the design, selection and annotation of BeadArray probes, which is a fundamental issue in data quality and interpretation. Here we present a pipeline for the complete genomic and transcriptomic re-annotation of Illumina probe sequences, also applicable to other...
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