Article
A major SNP resource for dissection of phenotypic and genetic variation in Pacific white shrimp (Litopenaeus vannamei).
Animal genetics - 1 Feb 2010
Ciobanu D C, Bastiaansen J W M, Magrin J, Rocha J L, Jiang D-H, Yu N, Geiger B, Deeb N, Rocha D, Gong H, Kinghorn B P, Plastow G S, van der Steen H A M, Mileham A J
Abstract excerpt
Bioinformatics and re-sequencing approaches were used for the discovery of sequence polymorphisms in Litopenaeus vannamei. A total of 1221 putative single nucleotide polymorphisms (SNPs) were identified in a pool of individuals from various commercial populations. A set of 211 SNPs were selected for further molecular validation and 88% showed variation in 637 samples representing three commercial breeding lines....
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