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Article

Predicting RNA-binding sites from the protein structure based on electrostatics, evolution and geometry.

Nucleic acids research - 1 Mar 2008

Chen Yao Chi, Lim Carmay

Abstract excerpt

An RNA-binding protein places a surface helix, beta-ribbon, or loop in an RNA helix groove and/or uses a cavity to accommodate unstacked bases. Hence, our strategy for predicting RNA-binding residues is based on detecting a surface patch and a disparate cleft. These were generated and scored acco...

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Identifiers

PMID: 18276647
DOI: 10.1093/nar/gkn008
PMCID: PMC2275128

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 4 Sept 2026. Prepared record publication-18276647-2026-09-04.2. Manifest publication-graph-cohort-2026-09-04.2.

Source receipt: PubMed via Helena Literature Corpus, retrieved 4 Sept 2026.

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