Prophage sequences defining hot spots of genome variation in Salmonella enterica serovar Typhimurium can be used to discriminate between field isolates.

doi:10.1128/JCM.00729-07

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Article

Prophage sequences defining hot spots of genome variation in Salmonella enterica serovar Typhimurium can be used to discriminate between field isolates.

Journal of clinical microbiology - 1 Aug 2007

Cooke Fiona J, Wain John, Fookes Maria, Ivens Alasdair, Thomson Nicholas, Brown Derek J, Threlfall E John, Gunn George, Foster Geoffrey, Dougan Gordon

Abstract excerpt

Sixty-one Salmonella enterica serovar Typhimurium isolates of animal and human origin, matched by phage type, antimicrobial resistance pattern, and place of isolation, were analyzed by microbiological and molecular techniques, including pulsed-field gel electrophoresis (PFGE) and plasmid profiling. PFGE identified 10 profiles that clustered by phage type and antibiotic resistance pattern with human and animal...

Topics

Animals
Bacterial Typing Techniques
Cattle
Cluster Analysis
Crows
DNA Fingerprinting
DNA, Bacterial
Electrophoresis, Gel, Pulsed-Field
Genome, Bacterial
Genomic Islands

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Genotype

Humans

Oligonucleotide Array Sequence Analysis

Polymerase Chain Reaction

Polymorphism, Genetic

Prophages

Recombination, Genetic

Salmonella Infections

Source

Open in PubMed Open full text

Identifiers

PMID: 17522270
DOI: 10.1128/JCM.00729-07
PMCID: PMC1951247

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 29 Aug 2026. Prepared record publication-17522270-2026-08-29.1. Manifest publication-graph-cohort-2026-08-29.1.

Source receipt: PubMed via Helena Literature Corpus, retrieved 29 Aug 2026.

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