Article
A primary assembly of a bovine haplotype block map based on a 15,036-single-nucleotide polymorphism panel genotyped in holstein-friesian cattle.
Genetics - 1 Jun 2007
Khatkar Mehar S, Zenger Kyall R, Hobbs Matthew, Hawken Rachel J, Cavanagh Julie A L, Barris Wes, McClintock Alexander E, McClintock Sara, Thomson Peter C, Tier Bruce, Nicholas Frank W, Raadsma Herman W
Abstract excerpt
Analysis of data on 1000 Holstein-Friesian bulls genotyped for 15,036 single-nucleotide polymorphisms (SNPs) has enabled genomewide identification of haplotype blocks and tag SNPs. A final subset of 9195 SNPs in Hardy-Weinberg equilibrium and mapped on autosomes on the bovine sequence assembly (release Btau 3.1) was used in this study. The average intermarker spacing was 251.8 kb. The average minor allele...
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