Article
Bioinformatics-enabled identification of the HrpL regulon and type III secretion system effector proteins of Pseudomonas syringae pv. phaseolicola 1448A.
Molecular plant-microbe interactions : MPMI - 1 Nov 2006
Vencato Monica, Tian Fang, Alfano James R, Buell C Robin, Cartinhour Samuel, DeClerck Genevieve A, Guttman David S, Stavrinides John, Joardar Vinita, Lindeberg Magdalen, Bronstein Philip A, Mansfield John W, Myers Christopher R, Collmer Alan, Schneider David J
Abstract excerpt
The ability of Pseudomonas syringae pv. phaseolicola to cause halo blight of bean is dependent on its ability to translocate effector proteins into host cells via the hypersensitive response and pathogenicity (Hrp) type III secretion system (T3SS). To identify genes encoding type III effectors and other potential virulence factors that are regulated by the HrpL alternative sigma factor, we used a hidden Markov...
Topics
- Adenylyl Cyclases
- Arabidopsis
- Bacterial Proteins
- Computational Biology
- DNA-Binding Proteins
- Gene Expression Regulation, Bacterial
- Genes, Reporter
- Markov Chains