Article
Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress.
Molecular genetics and genomics : MGG - 1 Dec 2005
Rostoks Nils, Mudie Sharon, Cardle Linda, Russell Joanne, Ramsay Luke, Booth Allan, Svensson Jan T, Wanamaker Steve I, Walia Harkamal, Rodriguez Edmundo M, Hedley Peter E, Liu Hui, Morris Jenny, Close Timothy J, Marshall David F, Waugh Robbie
Abstract excerpt
More than 2,000 genome-wide barley single nucleotide polymorphisms (SNPs) were developed by resequencing unigene fragments from eight diverse accessions. The average genome-wide SNP frequency observed in 877 unigenes was 1 SNP per 200 bp. However, SNP frequency was highly variable with the least number of SNP and SNP haplotypes observed within European cultivated germplasm reflecting effects of breeding history...
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