Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Molecular barcodes for soil nematode identification.

Molecular ecology - 1 Apr 2002

Floyd Robin, Abebe Eyualem, Papert Artemis, Blaxter Mark

Abstract excerpt

Using a molecular barcode, derived from single-specimen polymerase chain reaction (PCR) and sequencing of the 5' segment of the small subunit ribosomal RNA (SSU) gene, we have developed a molecular operational taxonomic unit (MOTU) scheme for soil nematodes. Individual specimens were considered to belong to the same MOTU when the sequenced segment of 450 bases was > 99.5% identical. A Scottish upland...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to DNA, Ribosomal
Share to Genetic Variation
Share to Nematoda

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Polymerase Chain Reaction

Share to RNA, Ribosomal, 18S

Share to Sequence Analysis, DNA

Source

Identifiers

PMID: 11972769
DOI: 10.1046/j.1365-294x.2002.01485.x

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Molecular barcodes for soil nematode identification.PMID 11972769Read ↗

Development and application of a DNA metabarcoding method for comprehensive analysis of soil nematode communitiesSemantic proximity Read ↗

New barcoded primers for efficient retrieval of cercozoan sequences in high-throughput environmental diversity surveys, with emphasis on worldwide biological soil crusts.Semantic proximity Read ↗

Increasing the digital repository of DNA barcoding sequences of sand flies (Psychodidae: Phlebotominae).Semantic proximity Read ↗

A comparison of rpoB and 16S rRNA as markers in pyrosequencing studies of bacterial diversity.Semantic proximity Read ↗

Potential of DNA barcoding for earthworm research in taxonomy and ecologySemantic proximity Read ↗

Testing three pipelines for 18S rDNA-based metabarcoding of soil faunal diversity.Semantic proximity Read ↗

Microbial phylogeny and diversity: small subunit ribosomal RNA sequence analysis and beyond.Semantic proximity Read ↗

Traditional System Versus DNA Barcoding in Identification of Bamboo Species: A Systematic Review.Semantic proximity Read ↗

Potential bias of fungal 18S rDNA and internal transcribed spacer polymerase chain reaction primers for estimating fungal biodiversity in soil.Semantic proximity Read ↗

Oscheius tipulae, a widespread hermaphroditic soil nematode, displays a higher genetic diversity and geographical structure than Caenorhabditis elegans.Semantic proximity Read ↗

Biological invasions in soil: DNA barcoding as a monitoring tool in a multiple taxa survey targeting European earthworms and springtails in North AmericaSemantic proximity Read ↗

Combining environmental DNA and remote sensing for efficient, fine-scale mapping of arthropod biodiversitySemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.