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Article

Chromosome-scale genomes and population resequencing resolve subgenome diversity and halophyte adaptation in Salicornia.

Nature communications - 11 Sept 2026

Wang Yunchuan, Adhikari Laxman, Leal Lina María Cáceres, Kovalchuk Nataliya, Čížková Jana, Beránková Denisa, Saber Noha, Fiene Gabriele, Al-Turki Turki A, Rivera Luis F, Molina-Freaner Francisco, Hayano-Kanashiro Corina, Lee Dongryung, Jordine Angelina, van Dongen Joost T, De Battisti Davide, Duan Huirong, Zeng Xiaofei, Bougouffa Salim, Gao Xin, Pailles Yveline, Poland Jesse, Hřibová Eva, Tester Mark, Melino Vanessa J

Abstract excerpt

Amid escalating water scarcity and groundwater depletion, halophytes such as Salicornia (Amaranthaceae) represent valuable models for extreme salt tolerance and hold promise for saltwater-based agriculture. Here, we show chromosome-scale genome assemblies for six Salicornia species, revealing four distinct subgenomes, reconciling our assemblies with two existing reference genomes (S. ramosissima UK and S....

Read the complete abstract on PubMed

Topics

Chenopodiaceae
Genome, Plant
Salt-Tolerant Plants
Phylogeny

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Chromosomes, Plant

Genetic Variation

Salt Tolerance

Adaptation, Physiological

Source

Open in PubMed Open full text

Identifiers

PMID: 42728248
DOI: 10.1038/s41467-026-77346-x
PMCID: PMC13569856

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 21 Oct 2026.

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