Genetic Diversity and Hospital Circulation of Opportunistic Pathogens in COVID-19 ICUs: Whole-Genome Sequencing Data.

doi:10.3390/pathogens15080845

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Genetic Diversity and Hospital Circulation of Opportunistic Pathogens in COVID-19 ICUs: Whole-Genome Sequencing Data.

Pathogens (Basel, Switzerland) - 13 Aug 2026

Smirnova Svetlana S, Avdyunin Dmitry D, Stagilskaya Yulia S, Kameneva Anastasia A, Platonova Tatiana A, Zhuikov Nikolai N, Itani Tarek M, Semenov Aleksandr V

Abstract excerpt

The COVID-19 pandemic led to a dramatic increase in healthcare-associated infections and antimicrobial resistance, particularly in intensive care units (ICUs). The aim of this study was to provide a comprehensive genomic characterisation of all clinically significant opportunistic pathogens (OPs) isolated from patients and the hospital environment in COVID-19 ICUs, and to use these data to reconstruct...

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PMID: 42654782
DOI: 10.3390/pathogens15080845
PMCID: PMC13516873

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