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Genetic Variation in Jamaican Populations of the Coffee Berry Borer, Hypothenemus hampei.

Genome biology and evolution - 1 Nov 2024

Errbii Mohammed, Myrie Ameka, Robinson Dwight, Schultner Eva, Schrader Lukas, Oettler Jan

Abstract excerpt

The coffee berry borer (CBB) Hypothenemus hampei was first described in Africa in 1867 and has spread to all major coffee-producing regions worldwide, including Jamaica. Using long-read sequencing, we produced a new high-quality reference genome (172.7 Mb) for the Jamaican strain of the CBB, with 93% of the genome assembled into 14 scaffolds. Whole genome sequencing of pooled samples from different populations...

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Coffea
DNA Transposable Elements
Genetic Variation
Genome, Insect
Jamaica

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PMID: 39486017
DOI: 10.1093/gbe/evae217
PMCID: PMC11529894

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