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Assessing Genetic Diversity in Endangered Plant Orchidantha chinensis: Chloroplast Genome Assembly and Simple Sequence Repeat Marker-Based Evaluation.

International journal of molecular sciences - 17 Oct 2024

Zhou Yiwei, Tan Jianjun, Huang Lishan, Ye Yuanjun, Xu Yechun

Abstract excerpt

Orchidantha chinensis T. L. Wu, an endemic species in China, is listed as a key protected wild plant in Guangdong Province. However, the lack of reports on the chloroplast genome and simple sequence repeat (SSR) markers has hindered the assessment of its genetic diversity and conservation strategies. The limited number of molecular markers to assess the genetic diversity of this species, and thus develop proper...

Topics

Genome, Chloroplast
Microsatellite Repeats
Orchidaceae
Endangered Species
Phylogeny
Genetic Variation
Polymorphism, Genetic
Genetic Markers
High-Throughput Nucleotide Sequencing
Expressed Sequence Tags

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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PMID: 39456923
DOI: 10.3390/ijms252011137
PMCID: PMC11508217

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