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Insights from homozygous signatures of cervus nippon revealed genetic architecture for components of fitness.

Mammalian genome : official journal of the International Mammalian Genome Society - 1 Dec 2024

Goli Rangasai Chandra, Mahar Karan, Manohar Peela Sai, Chishi Kiyevi G, Prabhu Immanual Gilwax, Choudhary Sonu, Rathi Pallavi, Chinnareddyvari Chandana Sree, Haritha Pala, Metta Muralidhar, Shetkar Mahantesh, Kumar Amit, N D Chethan Patil, Vidyasagar, Sukhija Nidhi, Kanaka K K

Abstract excerpt

This study investigates the genomic landscape of Sika deer populations, emphasizing the detection and characterization of runs of homozygosity (ROH) and their contribution towards components of fitness. Using 85,001 high-confidence SNPs, the investigation into ROH distribution unveiled nuanced patterns of autozygosity across individuals especially in 2 out of the 8 farms, exhibiting elevated ROH levels and mean...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Source

Identifiers

PMID: 39191871
DOI: 10.1007/s00335-024-10064-1

Genes

CAPSL
DCLK3
EGFLAM
SKP2
SPEF2

Provenance

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