An integrated metagenomic, metabolomic and transcriptomic survey of Populus across genotypes and environments.

doi:10.1038/s41597-024-03069-7

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Article

An integrated metagenomic, metabolomic and transcriptomic survey of Populus across genotypes and environments.

Scientific data - 5 Apr 2024

Schadt Christopher, Martin Stanton, Carrell Alyssa, Fortner Allison, Hopp Dan, Jacobson Dan, Klingeman Dawn, Kristy Brandon, Phillips Jana, Piatkowski Bryan, Miller Mark A, Smith Montana, Patil Sujay, Flynn Mark, Canon Shane, Clum Alicia, Mungall Christopher J, Pennacchio Christa, Bowen Benjamin, Louie Katherine, Northen Trent, Eloe-Fadrosh Emiley A, Mayes Melanie A, Muchero Wellington, Weston David J, Mitchell Julie, Doktycz Mitchel

Abstract excerpt

Bridging molecular information to ecosystem-level processes would provide the capacity to understand system vulnerability and, potentially, a means for assessing ecosystem health. Here, we present an integrated dataset containing environmental and metagenomic information from plant-associated microbial communities, plant transcriptomics, plant and soil metabolomics, and soil chemistry and activity...

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PMID: 38580669
DOI: 10.1038/s41597-024-03069-7
PMCID: PMC10997577

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