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The genotype list string code syntax for exchanging nomenclature-level genotyping results in clinical and research data management and analysis systems.

HLA - 1 Oct 2023

Mack Steven J, Sauter Jürgen, Robinson James, Osoegawa Kazutoyo, McKenzie Lloyd, Schneider Joel, Maiers Martin, Milius Robert P

Abstract excerpt

The nomenclatures used to describe HLA and killer-cell immunoglobulin-like receptor (KIR) alleles distinguish unique nucleotide and peptide sequences, and patterns of expression, but are insufficient for describing genotyping results, as description of ambiguities and relations across loci require terminology beyond allele names. The genotype list (GL) String grammar describes genotyping results for genetic...

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PMID: 37403548
DOI: 10.1111/tan.15145
PMCID: PMC10530409

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