Article
Outbreak.info genomic reports: scalable and dynamic surveillance of SARS-CoV-2 variants and mutations.
Nature methods - 1 Apr 2023
Gangavarapu Karthik, Latif Alaa Abdel, Mullen Julia L, Alkuzweny Manar, Hufbauer Emory, Tsueng Ginger, Haag Emily, Zeller Mark, Aceves Christine M, Zaiets Karina, Cano Marco, Zhou Xinghua, Qian Zhongchao, Sattler Rachel, Matteson Nathaniel L, Levy Joshua I, Lee Raphael T C, Freitas Lucas, Maurer-Stroh Sebastian, Suchard Marc A, Wu Chunlei, Su Andrew I, Andersen Kristian G, Hughes Laura D
Abstract excerpt
In response to the emergence of SARS-CoV-2 variants of concern, the global scientific community, through unprecedented effort, has sequenced and shared over 11 million genomes through GISAID, as of May 2022. This extraordinarily high sampling rate provides a unique opportunity to track the evolution of the virus in near real-time. Here, we present outbreak.info , a platform that currently tracks over 40 million...
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