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Sequence analysis of a feline- and porcine-origin G3P[9] rotavirus A strain in a child with acute gastroenteritis in Japan.

Archives of virology - 7 Jan 2023

Fukuda Yuya, Araki Kaoru, Hara Megumi, Yamashita Yuji, Adachi Shuhei, Honjo Saho, Togashi Atsuo, Hirakawa Satoshi, Fukumura Shinobu, Yamamoto Masaki, Tsugawa Takeshi

Abstract excerpt

We isolated the rare G3P[9] rotavirus strain RVA/Human-wt/JPN/R11-035/2015/G3P[9] from a 2-year-old girl presenting with vomiting and diarrhea who had daily contact with cats in Japan, 2015. Full-genome analysis revealed that the R11-035 strain had an AU-1-like genetic constellation, except for the NSP3 (T) gene: G3-P[9]-I3-R3-C3-M3-A3-N3-T1-E3-H6. Phylogenetic analysis showed that strain R11-035 is closely...

Topics

Female
Humans
Cats
Animals
Child
Swine
Child, Preschool
Rotavirus
Rotavirus Infections
Phylogeny
Japan

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Genome, Viral

Genotype

Gastroenteritis

Sequence Analysis

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Identifiers

PMID: 36609581
DOI: 10.1007/s00705-022-05685-3

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 31 Aug 2026.

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