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Article

The western redcedar genome reveals low genetic diversity in a self-compatible conifer.

Genome research - 1 Oct 2022

Shalev Tal J, Gamal El-Dien Omnia, Yuen Macaire M S, Shengqiang Shu, Jackman Shaun D, Warren René L, Coombe Lauren, van der Merwe Lise, Stewart Ada, Boston Lori B, Plott Christopher, Jenkins Jerry, He Guifen, Yan Juying, Yan Mi, Guo Jie, Breinholt Jesse W, Neves Leandro G, Grimwood Jane, Rieseberg Loren H, Schmutz Jeremy, Birol Inanc, Kirst Matias, Yanchuk Alvin D, Ritland Carol, Russell John H, Bohlmann Joerg

Abstract excerpt

We assembled the 9.8-Gbp genome of western redcedar (WRC; Thuja plicata), an ecologically and economically important conifer species of the Cupressaceae. The genome assembly, derived from a uniquely inbred tree produced through five generations of self-fertilization (selfing), was determined to be 86% complete by BUSCO analysis, one of the most complete genome assemblies for a conifer. Population genomic analysis...

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PMID: 36109148
DOI: 10.1101/gr.276358.121
PMCID: PMC9712635

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