Article
Host phenotype classification from human microbiome data is mainly driven by the presence of microbial taxa.
PLoS computational biology - 1 Apr 2022
Giliberti Renato, Cavaliere Sara, Mauriello Italia Elisa, Ercolini Danilo, Pasolli Edoardo
Abstract excerpt
Machine learning-based classification approaches are widely used to predict host phenotypes from microbiome data. Classifiers are typically employed by considering operational taxonomic units or relative abundance profiles as input features. Such types of data are intrinsically sparse, which opens the opportunity to make predictions from the presence/absence rather than the relative abundance of microbial taxa....
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