Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Phylogenetic analysis of 17271 Indian SARS-CoV-2 genomes to identify temporal and spatial hotspot mutations.

PloS one - 1 Jan 2022

Ghosh Nimisha, Nandi Suman, Saha Indrajit

Abstract excerpt

The second wave of SARS-CoV-2 has hit India hard and though the vaccination drive has started, moderate number of COVID affected patients is still present in the country, thereby leading to the analysis of the evolving virus strains. In this regard, multiple sequence alignment of 17271 Indian SARS-CoV-2 sequences is performed using MAFFT followed by their phylogenetic analysis using Nextstrain. Subsequently,...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to COVID-19
Share to Genome, Viral
Share to India

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Mutation

Share to Phylogeny

Share to SARS-CoV-2

Share to Spatio-Temporal Analysis

Source

Open in PubMed Open full text

Identifiers

PMID: 35344550
DOI: 10.1371/journal.pone.0265579
PMCID: PMC8959188

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Phylogenetic analysis of 17271 Indian SARS-CoV-2 genomes to identify temporal and spatial hotspot mutations.PMID 35344550Read ↗

Hotspot Mutations in SARS-CoV-2Semantic proximity Read ↗

Characterisation of SARS-CoV-2 clades based on signature SNPs unveils continuous evolution.Semantic proximity Read ↗

Genome-wide analysis of Indian SARS-CoV-2 genomes for the identification of genetic mutation and SNP.Semantic proximity Read ↗

Dynamic tracking of variant frequencies depicts the evolution of mutation sites amongst SARS-CoV-2 genomes from IndiaSemantic proximity Read ↗

Molecular characterization, phylogenetic and variation analyses of SARS-CoV-2 strains in IndiaSemantic proximity Read ↗

Comprehensive analysis of genomic diversity of SARS-CoV-2 in different geographic regions of India: an endeavour to classify Indian SARS-CoV-2 strains on the basis of co-existing mutations.Semantic proximity Read ↗

Genomic surveillance and phylodynamic analyses reveal emergence of novel mutation and co-mutation patterns within SARS-CoV2 variants prevalent in IndiaSemantic proximity Read ↗

Unique mutational changes in SARS-CoV-2 genome: A case study for the largest state of IndiaSemantic proximity Read ↗

Dynamic tracking of variant frequencies depicts the evolution of mutation sites amongst SARS-CoV-2 genomes from India.Semantic proximity Read ↗

Conserved SARS-CoV-2 Viral Peptides as Potential Prophylactic and Therapeutic TargetsSemantic proximity Read ↗

A comprehensive profile of genomic variations in the SARS-CoV-2 isolates from the state of Telangana, India.Semantic proximity Read ↗

PAN-INDIA 1000 SARS-CoV-2 RNA Genome Sequencing Reveals Important Insights into the OutbreakSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.