Article
Extending approximate Bayesian computation with supervised machine learning to infer demographic history from genetic polymorphisms using DIYABC Random Forest.
Molecular ecology resources - 1 Nov 2021
Collin François-David, Durif Ghislain, Raynal Louis, Lombaert Eric, Gautier Mathieu, Vitalis Renaud, Marin Jean-Michel, Estoup Arnaud
Abstract excerpt
Simulation-based methods such as approximate Bayesian computation (ABC) are well-adapted to the analysis of complex scenarios of populations and species genetic history. In this context, supervised machine learning (SML) methods provide attractive statistical solutions to conduct efficient inferences about scenario choice and parameter estimation. The Random Forest methodology (RF) is a powerful ensemble of SML...
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