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Sequencing Red Fox Y Chromosome Fragments to Develop Phylogenetically Informative SNP Markers and Glimpse Male-Specific Trans-Pacific Phylogeography.

Genes - 14 Jan 2021

Sacks Benjamin N, Lounsberry Zachary T, Rando Halie M, Kluepfel Kristopher, Fain Steven R, Brown Sarah K, Kukekova Anna V

Abstract excerpt

The red fox (Vulpes vulpes) has a wide global distribution with many ecotypes and has been bred in captivity for various traits, making it a useful evolutionary model system. The Y chromosome represents one of the most informative markers of phylogeography, yet it has not been well-studied in the red fox due to a lack of the necessary genomic resources. We used a target capture approach to sequence a portion of...

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Foxes
Phylogeography
Polymorphism, Single Nucleotide
Sequence Analysis, DNA
Y Chromosome

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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PMID: 33466657
DOI: 10.3390/genes12010097
PMCID: PMC7828831

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