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Phylogeographic analysis of H5N1 highly pathogenic avian influenza virus isolated in Cambodia from 2018 to 2019.

Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases - 1 Dec 2020

Park Yu-Ri, Lee Yu-Na, Lee Dong-Hun, Si Young-Jae, Baek Yoon-Gi, Bunnary Seng, Theary Ren, Tum Sothyra, Kye Soo-Jeong, Lee Myoung-Heon, Park Choi-Kyu, Lee Youn-Jeong

Abstract excerpt

Since 2004, several outbreaks of highly pathogenic avian influenza (HPAI) have been reported in Cambodia. Until 2013, all H5N1 viruses identified in Cambodia belonged to clade 1 and its subclades. H5N1 HPAI viruses belonging to clade 2.3.2.1c have been dominant since the beginning of 2014, with various genotypes (KH1-KH5) reported. Here, we isolated nine H5N1 HPAI viruses from domestic poultry farms and...

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PMID: 33096302
DOI: 10.1016/j.meegid.2020.104599

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