Large-Scale Complete-Genome Sequencing and Phylodynamic Analysis of Eastern Equine Encephalitis Virus Reveals Source-Sink Transmission Dynamics in the United States.

doi:10.1128/JVI.00074-18

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Community

Back to search

Article

Large-Scale Complete-Genome Sequencing and Phylodynamic Analysis of Eastern Equine Encephalitis Virus Reveals Source-Sink Transmission Dynamics in the United States.

Journal of virology - 15 Jun 2018

Tan Yi, Lam Tommy Tsan-Yuk, Heberlein-Larson Lea A, Smole Sandra C, Auguste Albert J, Hennigan Scott, Halpin Rebecca A, Fedorova Nadia, Puri Vinita, Stockwell Timothy B, Shilts Meghan H, Andreadis Theodore, Armstrong Philip M, Tesh Robert B, Weaver Scott C, Unnasch Thomas R, Ciota Alexander T, Kramer Laura D, Das Suman R

Abstract excerpt

Eastern equine encephalitis virus (EEEV) has a high case-fatality rate in horses and humans, and Florida has been hypothesized to be the source of EEEV epidemics for the northeastern United States. To test this hypothesis, we sequenced complete genomes of 433 EEEV strains collected within the United States from 1934 to 2014. Phylogenetic analysis suggested EEEV evolves relatively slowly and that transmission is...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Florida

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genome Size

Share to Genome, Viral

Share to Horses

Share to Massachusetts

Share to New York

Share to Phylogeography

Share to Whole Genome Sequencing

Source

Open in PubMed Open full text

Identifiers

PMID: 29618651
DOI: 10.1128/JVI.00074-18
PMCID: PMC5974483

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 3 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Large-Scale Complete-Genome Sequencing and Phylodynamic Analysis of Eastern Equine Encephalitis Virus Reveals Source-Sink Transmission Dynamics in the United States.PMID 29618651Read ↗

Molecular Epidemiology of Western Equine Encephalitis Virus, South America, 2023–2024Semantic proximity Read ↗

Eastern Equine Encephalitis Virus Taxonomy, Genomics, and Evolution.Semantic proximity Read ↗

Diagnosis and Genomic Characterization of the Largest Western Equine Encephalitis Virus Outbreak in Uruguay During 2023–2024Semantic proximity Read ↗

Phylogeography of equine infectious anemia virusSemantic proximity Read ↗

Divergent strains of EHV-1 in Swedish outbreaks during 2012 to 2021.Semantic proximity Read ↗

Everglades virus: an underrecognized disease-causing subtype of Venezuelan equine encephalitis virus endemic to Florida, USASemantic proximity Read ↗

Phylogeography of Equine Infectious Anemia VirusSemantic proximity Read ↗

Western equine encephalitis virus: evolutionary analysis of a declining alphavirus based on complete genome sequences.Semantic proximity Read ↗

Understanding the divergent evolution and epidemiology of H3N8 influenza viruses in dogs and horsesSemantic proximity Read ↗

Evolutionary patterns of eastern equine encephalitis virus in North versus South America suggest ecological differences and taxonomic revision.Semantic proximity Read ↗

Dynamics of Eastern equine encephalitis virus during the 2019 outbreak in the Northeast United StatesSemantic proximity Read ↗

Diagnosis and genomic characterization of the largest western equine encephalitis virus outbreak in Uruguay during 2023–2024Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.