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Article

Single step genome-wide association studies based on genotyping by sequence data reveals novel loci for the litter traits of domestic pigs.

Genomics - 1 May 2018

Wu Pingxian, Yang Qiang, Wang Kai, Zhou Jie, Ma Jideng, Tang Qianzhi, Jin Long, Xiao Weihang, Jiang Anan, Jiang Yanzhi, Zhu Li, Li Xuewei, Tang Guoqing

Abstract excerpt

In this study, data genotyping by sequence (GBS) was used to perform single step GWAS (ssGWAS) to identify SNPs associated with the litter traits in domestic pigs and search for candidate genes in the region of significant SNPs. After quality control, 167,355 high-quality SNPs from 532 pigs were obtained. Phenotypic traits on 2112 gilt litters from 532 pigs were recorded including total number born (TNB), number...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Source

Identifiers

PMID: 28943389
DOI: 10.1016/j.ygeno.2017.09.009

Genes

FOXO3
INTU

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