Diversification of mitochondrial genome of Daphnia galeata (Cladocera, Crustacea): Comparison with phylogenetic consideration of the complete sequences of clones isolated from five lakes in Japan.

doi:10.1016/j.gene.2017.02.019

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Article

Diversification of mitochondrial genome of Daphnia galeata (Cladocera, Crustacea): Comparison with phylogenetic consideration of the complete sequences of clones isolated from five lakes in Japan.

Gene - 5 May 2017

Tokishita Shin-Ichi, Shibuya Hiroyuki, Kobayashi Taku, Sakamoto Masaki, Ha Jin-Yong, Yokobori Shin-Ichi, Yamagata Hideo, Hanazato Takayuki

Abstract excerpt

To characterize genetic diversity and gene flow among Daphnia galeata populations, the complete nucleotide (nt) sequences of the mitochondrial (mt) DNAs of D. galeata clones isolated from five lakes in Japan (Lakes Shirakaba, Suwa, Kizaki, Kasumigaura, and Biwa) were determined. Comparison of non-synonymous (amino acid altering) substitution rates with synonymous substitution rates of D. galeata mt protein-coding...

Topics

Animals
Arthropod Proteins
Base Sequence
DNA, Mitochondrial
Daphnia
Gene Order
Genes, Mitochondrial
Genetic Variation
Genome, Mitochondrial
Japan

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Lakes

Mitochondrial Proteins

Phylogeny

Sequence Analysis, DNA

Sequence Homology, Nucleic Acid

Species Specificity

Source

Open in PubMed

Identifiers

PMID: 28219780
DOI: 10.1016/j.gene.2017.02.019

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