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Article

Vernalization-Triggered Intragenic Chromatin Loop Formation by Long Noncoding RNAs.

Developmental cell - 6 Feb 2017

Kim Dong-Hwan, Sung Sibum

Abstract excerpt

Long noncoding RNAs (lncRNAs) affect gene regulation through structural and regulatory interactions with associated proteins. The Polycomb complex often binds to lncRNAs in eukaryotes, and an lncRNA, COLDAIR, associates with Polycomb to mediate silencing of the floral repressor FLOWERING LOCUS C (FLC) during the process of vernalization in Arabidopsis. Here, we identified an additional Polycomb-binding lncRNA,...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 28132848
DOI: 10.1016/j.devcel.2016.12.021
PMCID: PMC5303624

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Vernalization-Triggered Intragenic Chromatin Loop Formation by Long Noncoding RNAs.PMID 28132848Read ↗

Modular function of long noncoding RNA, COLDAIR, in the vernalization response.Semantic proximity Read ↗

A gene loop containing the floral repressor FLC is disrupted in the early phase of vernalization.Semantic proximity Read ↗

Cold-induced silencing by long antisense transcripts of an Arabidopsis Polycomb target.Semantic proximity Read ↗

Coordination of the vernalization response through a VIN3 and FLC gene family regulatory network in Arabidopsis.Semantic proximity Read ↗

Vernalization requires epigenetic silencing of FLC by histone methylation.Semantic proximity Read ↗

The Arabidopsis thaliana vernalization response requires a polycomb-like protein complex that also includes VERNALIZATION INSENSITIVE 3.Semantic proximity Read ↗

Polycomb-group proteins repress the floral activator AGL19 in the FLC-independent vernalization pathway.Semantic proximity Read ↗

Noncoding SNPs influence a distinct phase of Polycomb silencing to destabilize long-term epigenetic memory at Arabidopsis FLC.Semantic proximity Read ↗

The PHD finger protein VRN5 functions in the epigenetic silencing of Arabidopsis FLC.Semantic proximity Read ↗

Physical clustering of FLC alleles during Polycomb-mediated epigenetic silencing in vernalization.Semantic proximity Read ↗

Epigenetic reprogramming that prevents transgenerational inheritance of the vernalized state.Semantic proximity Read ↗

Epigenetic maintenance of the vernalized state in Arabidopsis thaliana requires LIKE HETEROCHROMATIN PROTEIN 1.Semantic proximity Read ↗

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