Genetic diversity at the Dhn3 locus in Turkish Hordeum spontaneum populations with comparative structural analyses.

doi:10.1038/srep20966

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Article

Genetic diversity at the Dhn3 locus in Turkish Hordeum spontaneum populations with comparative structural analyses.

Scientific reports - 12 Feb 2016

Uçarlı Cüneyt, McGuffin Liam J, Çaputlu Süleyman, Aravena Andres, Gürel Filiz

Abstract excerpt

We analysed Hordeum spontaneum accessions from 21 different locations to understand the genetic diversity of HsDhn3 alleles and effects of single base mutations on the intrinsically disordered structure of the resulting polypeptide (HsDHN3). HsDHN3 was found to be YSK2-type with a low-frequency 6-aa deletion in the beginning of Exon 1. There is relatively high diversity in the intron region of HsDhn3 compared to...

Topics

Amino Acid Sequence
Base Sequence
Conserved Sequence
Genetic Loci
Genetic Variation
Haplotypes
Hordeum
Nucleotide Motifs
Nucleotides
Open Reading Frames
Plant Proteins
Sequence Alignment
Structural Homology, Protein

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PMID: 26869072
DOI: 10.1038/srep20966
PMCID: PMC4751488

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