Article
Identification of Genetic Variation between Obligate Plant Pathogens Pseudoperonospora cubensis and P. humuli Using RNA Sequencing and Genotyping-By-Sequencing.
PloS one - 1 Jan 2015
Summers Carly F, Gulliford Colwyn M, Carlson Craig H, Lillis Jacquelyn A, Carlson Maryn O, Cadle-Davidson Lance, Gent David H, Smart Christine D
Abstract excerpt
RNA sequencing (RNA-seq) and genotyping-by-sequencing (GBS) were used for single nucleotide polymorphism (SNP) identification from two economically important obligate plant pathogens, Pseudoperonospora cubensis and P. humuli. Twenty isolates of P. cubensis and 19 isolates of P. humuli were genotyped using RNA-seq and GBS. Principle components analysis (PCA) of each data set showed genetic separation between the...
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