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RNA-Seq Uncovers SNPs and Alternative Splicing Events in Asian Lotus (Nelumbo nucifera).

PloS one - 1 Jan 2015

Yang Mei, Xu Liming, Liu Yanling, Yang Pingfang

Abstract excerpt

RNA-Seq is an efficient way to comprehensively identify single nucleotide polymorphisms (SNPs) and alternative splicing (AS) events from the expressed genes. In this study, we conducted transcriptome sequencing of four Asian lotus (Nelumbo nucifera) cultivars using Illumina HiSeq2000 platform to identify SNPs and AS events in lotus. A total of 505 million pair-end RNA-Seq reads were generated from four cultivars,...

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PMID: 25928215
DOI: 10.1371/journal.pone.0125702
PMCID: PMC4416007

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