Article
Genomic characterization of a turkey reovirus field strain by Next-Generation Sequencing.
Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases - 1 Jun 2015
Tang Yi, Lu Huaguang, Sebastian Aswathy, Yeh Yin-Ting, Praul Craig A, Albert Istvan U, Zheng Si-Yang
Abstract excerpt
The genome of a turkey arthritis reovirus (TARV) field strain (Reo/PA/Turkey/22342/13), isolated from a turkey flock in Pennsylvania (PA) in 2013, has been sequenced using Next-Generation Sequencing (NGS) on the Illumina MiSeq platform. The genome of the PA TARV field strain was 23,496bp in length with 10 dsRNA segments encoding 12 viral proteins. The lengths of the genomic segments ranged from 1192bp (S4) to...
Topics
- Animals
- Conserved Sequence
- Genome, Viral
- High-Throughput Nucleotide Sequencing
- Open Reading Frames
- Orthoreovirus, Avian
- Pennsylvania
- Phylogeny
- Polymorphism, Single Nucleotide
- Poultry Diseases
- Sequence Analysis, RNA
- Turkeys