Article
Genome-wide patterns of genetic variation among silkworms.
Molecular genetics and genomics : MGG - 1 Aug 2015
Zhang Xingtan, Nie Mengyun, Zhao Qian, Wu Yuqian, Wang Genhong, Xia Qingyou
Abstract excerpt
Although the draft genome sequence of silkworm is available for a decade, its genetic variations, especially structural variations, are far from well explored. In this study, we identified 1,298,659 SNPs and 9,731 indels, of which 32 % of SNPs and 92.2 % of indels were novel compared to previous silkworm re-sequencing analysis. In addition, we applied a read depth-based approach to investigate copy number...
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