Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Genome-wide analysis of alternative splicing in Zea mays: landscape and genetic regulation.

The Plant cell - 1 Sept 2014

Thatcher Shawn R, Zhou Wengang, Leonard April, Wang Bing-Bing, Beatty Mary, Zastrow-Hayes Gina, Zhao Xiangyu, Baumgarten Andy, Li Bailin

Abstract excerpt

Alternative splicing enhances transcriptome diversity in all eukaryotes and plays a role in plant tissue identity and stress adaptation. To catalog new maize (Zea mays) transcripts and identify genomic loci that regulate alternative splicing, we analyzed over 90 RNA-seq libraries from maize inbred lines B73 and Mo17, as well as Syn10 doubled haploid lines (progenies from B73 × Mo17). Transcript discovery was...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Alternative Splicing
Share to Genome, Plant

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to MicroRNAs

Share to Organ Specificity

Share to Protein Isoforms

Share to Proteome

Share to Sequence Analysis, RNA

Share to Zea mays

Source

Open in PubMed Open full text

Identifiers

PMID: 25248552
DOI: 10.1105/tpc.114.130773
PMCID: PMC4213170

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Genome-wide analysis of alternative splicing in Zea mays: landscape and genetic regulation.PMID 25248552Read ↗

Maize (Zea mays L.) genome diversity as revealed by RNA-sequencing.Semantic proximity Read ↗

Identification of genes alternatively spliced in developing maize endosperm.Semantic proximity Read ↗

The Importance of a Genome-Wide Association Analysis in the Study of Alternative Splicing Mutations in Plants with a Special Focus on Maize.Semantic proximity Read ↗

Comparative transcriptomics uncovers alternative splicing changes and signatures of selection from maize improvement.Semantic proximity Read ↗

Insights into the maize pan-genome and pan-transcriptome.Semantic proximity Read ↗

Comprehensive analysis of 1,771 transcriptomes from 7 tissues enhance genetic and biological interpretations of maize complex traits.Semantic proximity Read ↗

Patterns of selection and tissue-specific expression among maize domestication and crop improvement loci.Semantic proximity Read ↗

MaizeCODE reveals bi-directionally expressed enhancers that harbor molecular signatures of maize domestication.Semantic proximity Read ↗

Draft Assembly of Elite Inbred Line PH207 Provides Insights into Genomic and Transcriptome Diversity in Maize.Semantic proximity Read ↗

Maize pan-transcriptome provides novel insights into genome complexity and quantitative trait variationSemantic proximity Read ↗

High-resolution profile of transcriptomes reveals a role of alternative splicing for modulating response to nitrogen in maize.Semantic proximity Read ↗

Maize pan-transcriptome provides novel insights into genome complexity and quantitative trait variation.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.