Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Conserved genetic regions across angiosperms as tools to develop single-copy nuclear markers in gymnosperms: an example using cycads.

Molecular ecology resources - 1 Jul 2014

Salas-Leiva Dayana E, Meerow Alan W, Francisco-Ortega Javier, Calonje Michael, Griffith M Patrick, Stevenson Dennis W, Nakamura Kyoko

Abstract excerpt

Several individuals of the Caribbean Zamia clade and other cycad genera were used to identify single-copy nuclear genes for phylogeographic and phylogenetic studies in Cycadales. Two strategies were employed to select target loci: (i) a tblastX search of Arabidopsis conserved ortholog sequence (COS) set and (ii) a tblastX search of Arabidopsis-Populus-Vitis-Oryza Shared Single-Copy genes (APVO SSC) against the...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Caribbean Region
Share to Conserved Sequence

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to DNA, Plant

Share to Genetic Markers

Share to Genetic Variation

Share to Molecular Sequence Data

Share to Phylogeography

Share to Sequence Analysis, DNA

Source

Identifiers

PMID: 24444413
DOI: 10.1111/1755-0998.12228

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 5 Sept 2026. Manifest publication-graph-cohort-2026-09-05.1.

Source receipt: pubmed, retrieved 5 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Conserved genetic regions across angiosperms as tools to develop single-copy nuclear markers in gymnosperms: an example using cycads.PMID 24444413Read ↗

Highly conserved low-copy nuclear genes as effective markers for phylogenetic analyses in angiosperms.Semantic proximity Read ↗

Comparison of intraspecific, interspecific and intergeneric chloroplast diversity in Cycads.Semantic proximity Read ↗

Analysis of 81 genes from 64 plastid genomes resolves relationships in angiosperms and identifies genome-scale evolutionary patterns.Semantic proximity Read ↗

Resolving interspecific relationships within evolutionarily young lineages using RNA-seq data: An example from Pedicularis section Cyathophora (Orobanchaceae).Semantic proximity Read ↗

Conservation Genetics of Two Highly Endangered and Poorly Known Species of Zamia (Zamiaceae: Cycadales) in Colombia.Semantic proximity Read ↗

Zamia (Cycadales: Zamiaceae) on Puerto Rico: asymmetric genetic differentiation and the hypothesis of multiple introductions.Semantic proximity Read ↗

Phylogenetic marker development for target enrichment from transcriptome and genome skim data: the pipeline and its application in southern African Oxalis (Oxalidaceae).Semantic proximity Read ↗

Comparative transcriptome provides strategy for phylogenetic analysis and SSR marker development in ChaenomelesSemantic proximity Read ↗

A comparative genomics strategy for targeted discovery of single-nucleotide polymorphisms and conserved-noncoding sequences in orphan crops.Semantic proximity Read ↗

A manually annotated Actinidia chinensis var. chinensis (kiwifruit) genome highlights the challenges associated with draft genomes and gene prediction in plants.Semantic proximity Read ↗

OrchidBase 6.0: Increasing the number of Cymbidium (Orchidaceae) genomes and new bioinformatic tools for orchid genome analysisSemantic proximity Read ↗

Chloroplast genome characteristics and phylogeny of the sinodielsia clade (apiaceae: apioideae).Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.