Article
Population genomic analyses from low-coverage RAD-Seq data: a case study on the non-model cucurbit bottle gourd.
The Plant journal : for cell and molecular biology - 1 Feb 2014
Xu Pei, Xu Shizhong, Wu Xiaohua, Tao Ye, Wang Baogen, Wang Sha, Qin Dehui, Lu Zhongfu, Li Guojing
Abstract excerpt
Restriction site-associated DNA sequencing (RAD-Seq), a next-generation sequencing-based genome 'complexity reduction' protocol, has been useful in population genomics in species with a reference genome. However, the application of this protocol to natural populations of genomically underinvestigated species, particularly under low-to-medium sequencing depth, has not been well justified. In this study, a Bayesian...
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