Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Whole genome resequencing in tomato reveals variation associated with introgression and breeding events.

BMC genomics - 14 Nov 2013

Causse Mathilde, Desplat Nelly, Pascual Laura, Le Paslier Marie-Christine, Sauvage Christopher, Bauchet Guillaume, Bérard Aurélie, Bounon Rémi, Tchoumakov Maria, Brunel Dominique, Bouchet Jean-Paul

Abstract excerpt

BACKGROUND: One of the goals of genomics is to identify the genetic loci responsible for variation in phenotypic traits. The completion of the tomato genome sequence and recent advances in DNA sequencing technology allow for in-depth characterization of genetic variation present in the tomato genome. Like many self-pollinated crops, cultivated tomato accessions show a low molecular but high phenotypic diversity....

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Breeding
Share to Chromosomes, Plant

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to DNA Copy Number Variations

Share to Evolution, Molecular

Share to Genome, Plant

Share to INDEL Mutation

Share to Molecular Sequence Annotation

Share to Solanum lycopersicum

Source

Open in PubMed Open full text

Identifiers

PMID: 24228636
DOI: 10.1186/1471-2164-14-791
PMCID: PMC4046683

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Whole genome resequencing in tomato reveals variation associated with introgression and breeding events.PMID 24228636Read ↗

Reanalysis of genome sequences of tomato accessions and its wild relatives: development of Tomato Genomic Variation (TGV) database integrating SNPs and INDELs polymorphisms.Semantic proximity Read ↗

Genome-wide sequence variations between wild and cultivated tomato species revisited by whole genome sequence mapping.Semantic proximity Read ↗

Tomato breeding in the genomics era: insights from a SNP array.Semantic proximity Read ↗

Genome-wide association studies using single nucleotide polymorphism markers developed by re-sequencing of the genomes of cultivated tomato.Semantic proximity Read ↗

Beyond SNPs: Scalable Detection of Structural Variants Unlocks Hidden Genetic Diversity in TomatoSemantic proximity Read ↗

Patchwork sequencing of tomato San Marzano and Vesuviano varieties highlights genome-wide variations.Semantic proximity Read ↗

Dissecting quantitative trait variation in the resequencing era: complementarity of bi-parental, multi-parental and association panels.Semantic proximity Read ↗

Leveraging Structural Variants to Unlock Hidden Genetic Diversity for Tomato Crop ImprovementSemantic proximity Read ↗

Diversity in conserved genes in tomato.Semantic proximity Read ↗

Exploration of a Resequenced Tomato Core Collection for Phenotypic and Genotypic Variation in Plant Growth and Fruit Quality Traits.Semantic proximity Read ↗

Whole genome resequencing of four Italian sweet pepper landraces provides insights on sequence variation in genes of agronomic value.Semantic proximity Read ↗

High-density SNP genotyping of tomato (Solanum lycopersicum L.) reveals patterns of genetic variation due to breeding.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.