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Article

MATE-CLEVER: Mendelian-inheritance-aware discovery and genotyping of midsize and long indels.

Bioinformatics (Oxford, England) - 15 Dec 2013

Marschall Tobias, Hajirasouliha Iman, Schönhuth Alexander

Abstract excerpt

MOTIVATION: Accurately predicting and genotyping indels longer than 30 bp has remained a central challenge in next-generation sequencing (NGS) studies. While indels of up to 30 bp are reliably processed by standard read aligners and the Genome Analysis Toolkit (GATK), longer indels have still resisted proper treatment. Also, discovering and genotyping longer indels has become particularly relevant owing to the...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 24072733
DOI: 10.1093/bioinformatics/btt556
PMCID: PMC3842759

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

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