Comparative genomics of plant-associated Pseudomonas spp.: insights into diversity and inheritance of traits involved in multitrophic interactions.

doi:10.1371/journal.pgen.1002784

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Article

Comparative genomics of plant-associated Pseudomonas spp.: insights into diversity and inheritance of traits involved in multitrophic interactions.

PLoS genetics - 1 Jul 2012

Loper Joyce E, Hassan Karl A, Mavrodi Dmitri V, Davis Edward W, Lim Chee Kent, Shaffer Brenda T, Elbourne Liam D H, Stockwell Virginia O, Hartney Sierra L, Breakwell Katy, Henkels Marcella D, Tetu Sasha G, Rangel Lorena I, Kidarsa Teresa A, Wilson Neil L, van de Mortel Judith E, Song Chunxu, Blumhagen Rachel, Radune Diana, Hostetler Jessica B, Brinkac Lauren M, Durkin A Scott, Kluepfel Daniel A, Wechter W Patrick, Anderson Anne J, Kim Young Cheol, Pierson Leland S, Pierson Elizabeth A, Lindow Steven E, Kobayashi Donald Y, Raaijmakers Jos M, Weller David M, Thomashow Linda S, Allen Andrew E, Paulsen Ian T

Abstract excerpt

We provide here a comparative genome analysis of ten strains within the Pseudomonas fluorescens group including seven new genomic sequences. These strains exhibit a diverse spectrum of traits involved in biological control and other multitrophic interactions with plants, microbes, and insects. Multilocus sequence analysis placed the strains in three sub-clades, which was reinforced by high levels of synteny, size...

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PMID: 22792073
DOI: 10.1371/journal.pgen.1002784
PMCID: PMC3390384

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