Article
Genome-wide functional analysis of the cotton transcriptome by creating an integrated EST database.
PloS one - 1 Jan 2011
Xie Fuliang, Sun Guiling, Stiller John W, Zhang Baohong
Abstract excerpt
A total of 28,432 unique contigs (25,371 in consensus contigs and 3,061 as singletons) were assembled from all 268,786 cotton ESTs currently available. Several in silico approaches [comparative genomics, Blast, Gene Ontology (GO) analysis, and pathway enrichment by Kyoto Encyclopedia of Genes and Genomes (KEGG)] were employed to investigate global functions of the cotton transcriptome. Cotton EST contigs were...
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