Genetic variability in the coat protein genes of Cymbidium mosaic virus isolates from orchids.

doi:10.1007/s11262-011-0683-8

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Article

Genetic variability in the coat protein genes of Cymbidium mosaic virus isolates from orchids.

Virus genes - 1 Apr 2012

Yoon Ju-Yeon, Chung Bong-Nam, Choi Gug-Seoun, Choi Seung-Kook

Abstract excerpt

The variability in the nucleotide (nt) and amino acid (aa) sequences of the coat protein (CP) of Cymbidium mosaic virus (CymMV), which naturally infects orchids worldwide, was investigated. The CP genes of 55 CymMV isolates originating from different locations in Korea were amplified using RT-PCR and sequenced. The encoded CP consists of 223 aa. The CP sequences of the Korean isolates were compared with those of...

Topics

Capsid Proteins
Cluster Analysis
Genetic Variation
Molecular Sequence Data
Orchidaceae
Phylogeography
Potexvirus
RNA, Viral
Republic of Korea
Reverse Transcriptase Polymerase Chain Reaction
Sequence Analysis, DNA
Sequence Homology, Amino Acid
Sequence Homology, Nucleic Acid

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Identifiers

PMID: 22015427
DOI: 10.1007/s11262-011-0683-8

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